ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ekyA1 - ECOD Domain | ECOD

ECOD/Domains/e5ekyA1

e5ekyA1

UID: 001827626

PDB

Range: A:3-251
PDB: 5EKY chain A(all domains)
UniProt: P0A6L0 (all domains)
Gene: deoC

Molecule: Deoxyribose-phosphate aldolase

3D Structure

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Related Domains

Browse other domains in DeoC →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDeoC(2002.1.1.76)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives ((S)-butane-1,3-diol, HEPES)

(S)-butane-1,3-diolBU2
DrugBank DB02202
HEPESEPE
DrugBank DB16872

Shown in the structure viewer. Drug annotations from .

Pfam Families

DeoC/LacD family aldolase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5EKY RCSB PDB: 5EKY PDBe: 5EKY UniProt: P0A6L0

Downloads

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