ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ijhB1 - ECOD Domain | ECOD

ECOD/Domains/e5ijhB1

e5ijhB1

UID: 001828362

RepresentativePDB

Range: B:2-204
PDB: 5IJH chain B(all domains)
UniProt: Q9UBH6 (all domains)
Gene: XPR1

Molecule: Xenotropic and polytropic retrovirus receptor 1

3D Structure

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Related Domains

Browse other domains in SPX →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSPX domain(1065)

HH-groupSPX domain(1065.1)

TT-groupSPX domain(1065.1.1)

FFamilySPX(1065.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SPX domain

External Links

ECOD PDB View: 5IJH RCSB PDB: 5IJH PDBe: 5IJH UniProt: Q9UBH6

Downloads

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