ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5d8nA1 - ECOD Domain | ECOD

ECOD/Domains/e5d8nA1

e5d8nA1

UID: 001828569

PDB

Range: A:55-249
PDB: 5D8N chain A(all domains)
UniProt: Q10712 (all domains)
Gene: LAPA1

Molecule: Leucine aminopeptidase 1, chloroplastic

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_M17_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMacro domain-like(7529)

HH-groupMacro domain-like(7529.1)

TT-groupMacro domain-like(7529.1.1)

FFamilyPeptidase_M17_N(7529.1.1.3)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02789Peptidase_M17_N

Cytosol aminopeptidase family, N-terminal domain

ClanCL0223MACRO

External Links

ECOD PDB View: 5D8N RCSB PDB: 5D8N PDBe: 5D8N UniProt: Q10712

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure