ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5f5wE1 - ECOD Domain | ECOD

ECOD/Domains/e5f5wE1

e5f5wE1

UID: 001828643

PDB

Range: E:3-280
PDB: 5F5W chain E(all domains)
UniProt: O67081 (all domains)
Gene: glyQ

Molecule: Glycine--tRNA ligase alpha subunit

3D Structure

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Related Domains

Browse other domains in tRNA-synt_2e →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2e(314.1.1.5)

Ligands

in contact, ≤ 4 Å

5'-O-(glycylsulfamoyl)adenosineG5A

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02091tRNA-synt_2e

Glycyl-tRNA synthetase alpha subunit

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 5F5W RCSB PDB: 5F5W PDBe: 5F5W UniProt: O67081

Downloads

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