ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5htbA1 - ECOD Domain | ECOD

ECOD/Domains/e5htbA1

e5htbA1

UID: 001828822

PDB

Range: A:471-798
PDB: 5HTB chain A(all domains)
UniProt: Q8TF76 (all domains)
Gene: HASPIN

Molecule: Serine/threonine-protein kinase haspin

3D Structure

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Related Domains

Browse other domains in Haspin_kinase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyHaspin_kinase(206.1.1.28)

Ligands

in contact, ≤ 4 Å

(3R)-4-amino-3-{[6-({[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]carbonyl}amino)hexanoyl]amino}-4-oxobutanoic acid (non-preferred name)6L5
(4R)-2-METHYLPENTANE-2,4-DIOLMRD
Sodium ionNA

Pfam Families

PF12330Haspin_kinase

Haspin like kinase domain

ClanCL0016PKinase

External Links

ECOD PDB View: 5HTB RCSB PDB: 5HTB PDBe: 5HTB UniProt: Q8TF76

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 2 additives (Dimethyl sulfoxide, (4r)-2-Methylpentane-2,4-Diol)

Dimethyl sulfoxideDMS
DrugBank DB01093
(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.