ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5jdqA1 - ECOD Domain | ECOD

ECOD/Domains/e5jdqA1

e5jdqA1

UID: 001828967

PDB

Range: A:1-301
PDB: 5JDQ chain A(all domains)
UniProt: Q57556 (all domains)
Gene: MJ0091

Molecule: Uncharacterized membrane protein MJ0091

3D Structure

Loading viewer...

Related Domains

Browse other domains in Na_Ca_ex →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSodium/Calcium exchanger(3745)

HH-groupSodium/Calcium exchanger(3745.1)

TT-groupSodium/Calcium exchanger(3745.1.1)

FFamilyNa_Ca_ex(3745.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
PentadecaneMYS
Sodium ionNA
metal
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate

Pfam Families

PF01699Na_Ca_ex

Sodium/calcium exchanger protein

External Links

ECOD PDB View: 5JDQ RCSB PDB: 5JDQ PDBe: 5JDQ UniProt: Q57556

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Strontium ionSR

metal

+ 1 additive (Pentaethylene glycol)

Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.