ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jpvG1 - ECOD Domain | ECOD

ECOD/Domains/e4jpvG1

e4jpvG1

UID: 001829562

PDB

Range: G:256-473
PDB: 4JPV chain G(all domains)
UniProt: Q0ED31 (all domains)
Gene: env

Molecule: HIV-1 CLADE A STRAIN 93TH057 GP120 WITH LOOP d AND LOOPD V5 REPLACED FROM HIV STRAIN 3415V1

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein L31e-like(259)

HH-groupRibosomal protein L31e/gp120 outer domain(259.1)

TT-groupRibosomal protein L31e/gp120 outer domain(259.1.1)

FFamilyGP120(259.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 4JPV RCSB PDB: 4JPV PDBe: 4JPV UniProt: Q0ED31

Downloads

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