ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ny2A1 - ECOD Domain | ECOD

ECOD/Domains/e2ny2A1

e2ny2A1

UID: 001829627

PDB

Range: A:83-255,A:474-491
PDB: 2NY2 chain A(all domains)
UniProt: P19551 (all domains)
Gene: env

Molecule: ENVELOPE GLYCOPROTEIN GP120

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupgp120 inner domain(1061)

HH-groupgp120 inner domain(1061.1)

TT-groupgp120 inner domain(1061.1.1)

FFamilyGP120(1061.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 2NY2 RCSB PDB: 2NY2 PDBe: 2NY2 UniProt: P19551

Downloads

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