ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rwyA2 - ECOD Domain | ECOD

ECOD/Domains/e4rwyA2

e4rwyA2

UID: 001829993

PDB

Range: A:44-255,A:474-492
PDB: 4RWY chain A(all domains)
UniProt: P35961 (all domains)
Gene: env

Molecule: HIV-1 YU2 gp120

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupgp120 inner domain(1061)

HH-groupgp120 inner domain(1061.1)

TT-groupgp120 inner domain(1061.1.1)

FFamilyGP120(1061.1.1.1)

Ligands

in contact, ≤ 4 Å

2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 4RWY RCSB PDB: 4RWY PDBe: 4RWY UniProt: P35961

Downloads

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