ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5acoA1 - ECOD Domain | ECOD

ECOD/Domains/e5acoA1

e5acoA1

UID: 001830045

PDB

Range: A:120-202
PDB: 5ACO chain A(all domains)
UniProt: Q2N0S6 (all domains)
Gene: env

Molecule: HIV-1 ENVELOPE GLYCOPROTEIN

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupV1/V2 domain in HIV gp120(6173)

HH-groupV1/V2 domain in HIV gp120(6173.1)

TT-groupV1/V2 domain in HIV gp120(6173.1.1)

FFamilyGP120(6173.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 5ACO RCSB PDB: 5ACO PDBe: 5ACO UniProt: Q2N0S6

Downloads

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