ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5acoD3 - ECOD Domain | ECOD

ECOD/Domains/e5acoD3

e5acoD3

UID: 001830053

PDB

Range: D:33-119,D:203-255,D:474-505
PDB: 5ACO chain D(all domains)
UniProt: Q2N0S6 (all domains)
Gene: env

Molecule: HIV-1 ENVELOPE GLYCOPROTEIN

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupgp120 inner domain(1061)

HH-groupgp120 inner domain(1061.1)

TT-groupgp120 inner domain(1061.1.1)

FFamilyGP120(1061.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 5ACO RCSB PDB: 5ACO PDBe: 5ACO UniProt: Q2N0S6

Downloads

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