ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5iyaB5 - ECOD Domain | ECOD

ECOD/Domains/e5iyaB5

e5iyaB5

UID: 001831776

PDB

Range: B:806-929
PDB: 5IYA chain B(all domains)
UniProt: P30876 (all domains)
Gene: POLR2B

Molecule: DNA-directed RNA polymerase II subunit RPB2

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb2_6 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupSingle hybrid motif(325.1.7)

FFamilyRNA_pol_Rpb2_6(325.1.7.2)

Pfam Families

PF00562RNA_pol_Rpb2_6

RNA polymerase Rpb2, domain 6

ClanCL0410LEF-8-like

External Links

ECOD PDB View: 5IYA RCSB PDB: 5IYA PDBe: 5IYA UniProt: P30876

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure