ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5iycI1 - ECOD Domain | ECOD

ECOD/Domains/e5iycI1

e5iycI1

UID: 001831872

PDB

Range: I:60-125
PDB: 5IYC chain I(all domains)
UniProt: P36954 (all domains)
Gene: POLR2I

Molecule: DNA-directed RNA polymerase II subunit RPB9

3D Structure

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Related Domains

Browse other domains in TFIIS_C →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyTFIIS_C(375.1.1.7)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01096Zn_ribbon_TFIIS

Transcription factor S-II (TFIIS)

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 5IYC RCSB PDB: 5IYC PDBe: 5IYC UniProt: P36954

Downloads

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