ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3pe7A1 - ECOD Domain | ECOD

ECOD/Domains/e3pe7A1

e3pe7A1

UID: 001833811

PDB

Range: A:1-388
PDB: 3PE7 chain A(all domains)
UniProt: A1JMA5 (all domains)
Gene: ogl

Molecule: Oligogalacturonate lyase

3D Structure

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Related Domains

Browse other domains in Pectate_lyase22 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyPectate_lyase22(5.1.3.31)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
MANGANESE (II) IONMN
metal

+ 1 additive (Acetate)

Acetate

Pfam Families

PF14583Pectate_lyase22

Oligogalacturonate lyase

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 3PE7 RCSB PDB: 3PE7 PDBe: 3PE7 UniProt: A1JMA5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.