ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nbqC1 - ECOD Domain | ECOD

ECOD/Domains/e4nbqC1

e4nbqC1

UID: 001836549

PDB

Range: C:462-557
PDB: 4NBQ chain C(all domains)
UniProt: Q83D87 (all domains)
Gene: pnp

Molecule: Polyribonucleotide nucleotidyltransferase

3D Structure

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Related Domains

Browse other domains in RNase_PH_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibonuclease PH domain 2-like(245)

HH-groupRibonuclease PH domain 2(245.1)

TT-groupRibonuclease PH domain 2(245.1.1)

FFamilyRNase_PH_C(245.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03725RNase_PH_C

3' exoribonuclease family, domain 2

External Links

ECOD PDB View: 4NBQ RCSB PDB: 4NBQ PDBe: 4NBQ UniProt: Q83D87

Downloads

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