ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4am8F1 - ECOD Domain | ECOD

ECOD/Domains/e4am8F1

e4am8F1

UID: 001837117

PDB

Range: F:149-336
PDB: 4AM8 chain F(all domains)
UniProt: Q837U7 (all domains)
Gene: ptcA

Molecule: PUTRESCINE CARBAMOYLTRANSFERASE

3D Structure

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Related Domains

Browse other domains in OTCace →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupAspartate/ornithine carbamoyltransferase(2003.1.14)

FFamilyOTCace(2003.1.14.1)

Ligands

in contact, ≤ 4 Å

GuanidineGAI
drugDrugBank DB00536
N-(Phosphonoacetyl)-L-OrnithinePAO
drugDrugBank DB02011

Pfam Families

Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4AM8 RCSB PDB: 4AM8 PDBe: 4AM8 UniProt: Q837U7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

L-Glutamine

drugDrugBank DB00130within 5 Å only

IsoleucineILE

drugDrugBank DB00167within 5 Å only

+ 1 additive (Tromethamine)

TromethamineTRS
DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.