ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ff4A2 - ECOD Domain | ECOD

ECOD/Domains/e4ff4A2

e4ff4A2

UID: 001837288

PDB

Range: A:325-444
PDB: 4FF4 chain A(all domains)
UniProt: Q859P9 (all domains)
Gene: 50

Molecule: Virion RNA polymerase

3D Structure

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Related Domains

Browse other domains in vRNAP_dom_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-group"fingers" domain in bacteriophage RB69-like DNA polymerase I(4970)

HH-group"fingers" domain in bacteriophage RB69-like DNA polymerase I(4970.1)

TT-group"fingers" domain in bacteriophage RB69-like DNA polymerase I(4970.1.1)

FFamilyvRNAP_dom_2(4970.1.1.5)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-Monophosphate5GP
drugDrugBank DB01972
Adenosine phosphateAMP
drugDrugBank DB00131

Shown in the structure viewer.

Pfam Families

PF21867vRNAP_dom_2

Virion DNA-directed RNA polymerase domain

External Links

ECOD PDB View: 4FF4 RCSB PDB: 4FF4 PDBe: 4FF4 UniProt: Q859P9

Downloads

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Drug annotations from DrugDomain.