ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ff4A4 - ECOD Domain | ECOD

ECOD/Domains/e4ff4A4

e4ff4A4

UID: 001837290

PDB

Range: A:598-917
PDB: 4FF4 chain A(all domains)
UniProt: Q859P9 (all domains)
Gene: 50

Molecule: Virion RNA polymerase

3D Structure

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Related Domains

Browse other domains in N4_RNAP_helical →

Classification

AArchitecturealpha arrays(a.6)

XX-grouphelical bundle in Bacillus stearothermophilus-like DNA polymerase I(4964)

HH-grouphelical bundle in Bacillus stearothermophilus-like DNA polymerase I(4964.1)

TT-grouphelical bundle in Bacillus stearothermophilus-like DNA polymerase I(4964.1.1)

FFamilyN4_RNAP_helical(4964.1.1.3)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateAMP
drugDrugBank DB00131
PYROPHOSPHATE 2-POP

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21894N4_RNAP_helical

Bacteriophage N4 RNA polymerase, helical domain

External Links

ECOD PDB View: 4FF4 RCSB PDB: 4FF4 PDBe: 4FF4 UniProt: Q859P9

Downloads

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