ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3k0bA4 - ECOD Domain | ECOD

ECOD/Domains/e3k0bA4

e3k0bA4

UID: 001837404

RepresentativePDB

Range: A:1-61
PDB: 3K0B chain A(all domains)
UniProt: Q71YC9 (all domains)

Molecule: predicted N6-adenine-specific DNA methylase

3D Structure

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Related Domains

Browse other domains in RlmL_1st →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin-like domain in ThiI(304.120)

TT-groupFerredoxin-like domain in ThiI(304.120.1)

FFamilyRlmL_1st(304.120.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22020RlmL_1st

RlmL ferredoxin-like domain

External Links

ECOD PDB View: 3K0B RCSB PDB: 3K0B PDBe: 3K0B UniProt: Q71YC9

Downloads

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