ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5im3A4 - ECOD Domain | ECOD

ECOD/Domains/e5im3A4

e5im3A4

UID: 001838833

RepresentativePDB

Range: A:369-912
PDB: 5IM3 chain A(all domains)
UniProt: Q9I4I1 (all domains)
Gene: nrdA

Molecule: Ribonucleoside-diphosphate reductase

3D Structure

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Related Domains

Browse other domains in Ribonuc_red_lgC →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTen stranded beta/alpha barrel(2500)

HH-groupTen stranded beta/alpha barrel(2500.1)

TT-groupTen stranded beta/alpha barrel(2500.1.1)

FFamilyRibonuc_red_lgC(2500.1.1.2)

Ligands

in contact, ≤ 4 Å

dATPDTP
drugDrugBank DB03222

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02867Ribonuc_red_lgC

Ribonucleotide reductase, barrel domain

ClanCL0339PFL-like

External Links

ECOD PDB View: 5IM3 RCSB PDB: 5IM3 PDBe: 5IM3 UniProt: Q9I4I1

Downloads

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