ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5i8hA3 - ECOD Domain | ECOD

ECOD/Domains/e5i8hA3

e5i8hA3

UID: 001839243

PDB

Range: A:31-119,A:203-255,A:474-507
PDB: 5I8H chain A(all domains)
UniProt: Q2N0S6 (all domains)
Gene: env

Molecule: BG505 SOSIP.664 gp120

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupgp120 inner domain(1061)

HH-groupgp120 inner domain(1061.1)

TT-groupgp120 inner domain(1061.1.1)

FFamilyGP120(1061.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 5I8H RCSB PDB: 5I8H PDBe: 5I8H UniProt: Q2N0S6

Downloads

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