ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3q13A1 - ECOD Domain | ECOD

ECOD/Domains/e3q13A1

e3q13A1

UID: 001839925

RepresentativePDB

Range: A:192-427
PDB: 3Q13 chain A(all domains)
UniProt: Q9HCB6 (all domains)
Gene: SPON1

Molecule: Spondin-1

3D Structure

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Related Domains

Browse other domains in Spond_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupC2 domain(11.2)

TT-groupC2 domain(11.2.1)

FFamilySpond_N(11.2.1.4)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 2 additives (Acetate, Sulfate ion)

AcetateACT
DrugBank DB14511
Sulfate ion

Pfam Families

PF06468Spond_N

Spondin_N

ClanCL0154C2

External Links

ECOD PDB View: 3Q13 RCSB PDB: 3Q13 PDBe: 3Q13 UniProt: Q9HCB6

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.