ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fh8A1 - ECOD Domain | ECOD

ECOD/Domains/e5fh8A1

e5fh8A1

UID: 001840421

PDB

Range: A:652-763
PDB: 5FH8 chain A(all domains)
UniProt: Q86U86 (all domains)
Gene: PBRM1

Molecule: Protein polybromo-1

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

6-chloranyl-3-(2-ethylbutyl)-4~{H}-pyrrolo[1,2-a]quinazolin-5-one5XK

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 5FH8 RCSB PDB: 5FH8 PDBe: 5FH8 UniProt: Q86U86

Downloads

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