ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hroA1 - ECOD Domain | ECOD

ECOD/Domains/e5hroA1

e5hroA1

UID: 001840530

PDB

Range: A:428-554
PDB: 5HRO chain A(all domains)
UniProt: P03366 (all domains)
Gene: gag-pol

Molecule: HIV-1 REVERSE TRANSCRIPTASE P66 SUBUNIT

3D Structure

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Related Domains

Browse other domains in RNase_H →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRNase_H(2484.1.1.4)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546within 5 Å only

Shown in the structure viewer.

Pfam Families

PF00075RNase_H

RNase H

ClanCL0219RNase_H

External Links

ECOD PDB View: 5HRO RCSB PDB: 5HRO PDBe: 5HRO UniProt: P03366

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.