ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fb8C1 - ECOD Domain | ECOD

ECOD/Domains/e5fb8C1

e5fb8C1

UID: 001841385

PDB

Range: C:27-118
PDB: 5FB8 chain C(all domains)
UniProt: Q14005 (all domains)
Gene: IL16

Molecule: Pro-interleukin-16

3D Structure

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Related Domains

Browse other domains in PDZ →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPDZ domain(7)

HH-groupPDZ domain(7.1)

TT-groupPDZ domain(7.1.1)

FFamilyPDZ(7.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, Tromethamine)

Sulfate ionSO4
DrugBank DB14546
TromethamineTRS
DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PDZ domain

ClanCL0466PDZ-like

External Links

ECOD PDB View: 5FB8 RCSB PDB: 5FB8 PDBe: 5FB8 UniProt: Q14005

Downloads

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