ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5iz5B1 - ECOD Domain | ECOD

ECOD/Domains/e5iz5B1

e5iz5B1

UID: 001841611

PDB

Range: B:276-541,B:577-807
PDB: 5IZ5 chain B(all domains)
UniProt: Q86XP0 (all domains)
Gene: PLA2G4D

Molecule: Cytosolic phospholipase A2 delta

3D Structure

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Related Domains

Browse other domains in PLA2_B →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupFabD/lysophospholipase-like(2007.1.19)

FFamilyPLA2_B(2007.1.19.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Lysophospholipase catalytic domain

ClanCL0323Patatin

External Links

ECOD PDB View: 5IZ5 RCSB PDB: 5IZ5 PDBe: 5IZ5 UniProt: Q86XP0

Downloads

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