ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5bz0A1 - ECOD Domain | ECOD

ECOD/Domains/e5bz0A1

e5bz0A1

UID: 001841848

PDB

Range: A:57-304
PDB: 5BZ0 chain A(all domains)
UniProt: P0C6Y1 (all domains)
Gene: rep

Molecule: Replicase polyprotein 1ab

3D Structure

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Related Domains

Browse other domains in CoV_peptidase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyCoV_peptidase(219.1.1.43)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08715CoV_peptidase

Coronavirus papain-like peptidase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 5BZ0 RCSB PDB: 5BZ0 PDBe: 5BZ0 UniProt: P0C6Y1

Downloads

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