ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dt2B1 - ECOD Domain | ECOD

ECOD/Domains/e5dt2B1

e5dt2B1

UID: 001841900

PDB

Range: B:4-330
PDB: 5DT2 chain B(all domains)
UniProt: Q8TEK3 (all domains)
Gene: DOT1L

Molecule: Histone-lysine N-methyltransferase, H3 lysine-79 specific

3D Structure

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Related Domains

Browse other domains in DOT1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyDOT1(2003.1.5.65)

Ligands

in contact, ≤ 4 Å

N~4~-methyl-N~2~-[2-methyl-1-(2-phenoxyphenyl)-1H-indol-6-yl]pyrimidine-2,4-diamine5EV

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Histone methylation protein DOT1

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5DT2 RCSB PDB: 5DT2 PDBe: 5DT2 UniProt: Q8TEK3

Downloads

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