ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hdmB1 - ECOD Domain | ECOD

ECOD/Domains/e5hdmB1

e5hdmB1

UID: 001842037

PDB

Range: B:7-327
PDB: 5HDM chain B(all domains)
UniProt: P42799 (all domains)
Gene: GSA1

Molecule: Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplastic

3D Structure

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Related Domains

Browse other domains in Aminotran_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_3(7577.1.1.2)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
Pyridoxamine-5'-PhosphatePMP
drugDrugBank DB02142

Shown in the structure viewer.

Pfam Families

PF00202Aminotran_3

Aminotransferase class-III

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 5HDM RCSB PDB: 5HDM PDBe: 5HDM UniProt: P42799

Downloads

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Drug annotations from DrugDomain.