ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jybB1 - ECOD Domain | ECOD

ECOD/Domains/e5jybB1

e5jybB1

UID: 001842283

PDB

Range: B:162-343
PDB: 5JYB chain B(all domains)
UniProt: Q734X3 (all domains)
Gene: BCE_3281

Molecule: MccC family protein

3D Structure

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Related Domains

Browse other domains in Peptidase_S66C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThe "swivelling" beta/beta/alpha domains(2487)

HH-groupThe "swivelling" beta/beta/alpha domain(2487.1)

TT-groupThe "swivelling" beta/beta/alpha domain(2487.1.1)

FFamilyPeptidase_S66C(2487.1.1.18)

Ligands

in contact, ≤ 4 Å

2-ButanolSBT
drugDrugBank DB02606
Hexaethylene glycolP6G

+ 3 additives (HEPES, Glycerin, 1,2-ETHANEDIOL)

HEPES

Pfam Families

PF17676Peptidase_S66C

LD-carboxypeptidase C-terminal domain

ClanCL0364Leu-IlvD

External Links

ECOD PDB View: 5JYB RCSB PDB: 5JYB PDBe: 5JYB UniProt: Q734X3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB16872

GlycerinGOL

DrugBank DB09462

1,2-ETHANEDIOLEDO

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.