ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5k5dB2 - ECOD Domain | ECOD

ECOD/Domains/e5k5dB2

e5k5dB2

UID: 001842314

PDB

Range: B:1-84
PDB: 5K5D chain B(all domains)
UniProt: D0KSP7 (all domains)
Gene: Ssol_1539

Molecule: ParB domain protein nuclease

3D Structure

Loading viewer...

Related Domains

Browse other domains in this classification →

Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.

External Links

ECOD PDB View: 5K5D RCSB PDB: 5K5D PDBe: 5K5D UniProt: D0KSP7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure