ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5k9fA1 - ECOD Domain | ECOD

ECOD/Domains/e5k9fA1

e5k9fA1

UID: 001842343

PDB

Range: A:9-111
PDB: 5K9F chain A(all domains)
UniProt: Q13VQ7 (all domains)
Gene: Bxe_A1114

Molecule: NIPSNAP domain protein

3D Structure

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Related Domains

Browse other domains in NIPSNAP →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupDimeric alpha+beta barrel(304.4)

TT-groupDimeric alpha+beta barrel(304.4.1)

FFamilyNIPSNAP(304.4.1.15)

Ligands

in contact, ≤ 4 Å

Oxamic AcidOXM
drugDrugBank DB03940

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer.

Pfam Families

PF07978NIPSNAP

NIPSNAP

ClanCL0032Dim_A_B_barrel

External Links

ECOD PDB View: 5K9F RCSB PDB: 5K9F PDBe: 5K9F UniProt: Q13VQ7

Downloads

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Drug annotations from DrugDomain.