ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kakD1 - ECOD Domain | ECOD

ECOD/Domains/e5kakD1

e5kakD1

UID: 001842353

PDB

Range: D:0-115
PDB: 5KAK chain D(all domains)
UniProt: Q13PY7 (all domains)
Gene: Bxe_B2134

Molecule: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in NIPSNAP →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupDimeric alpha+beta barrel(304.4)

TT-groupDimeric alpha+beta barrel(304.4.1)

FFamilyNIPSNAP(304.4.1.15)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07978NIPSNAP

NIPSNAP

ClanCL0032Dim_A_B_barrel

External Links

ECOD PDB View: 5KAK RCSB PDB: 5KAK PDBe: 5KAK UniProt: Q13PY7

Downloads

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