ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3qidA1 - ECOD Domain | ECOD

ECOD/Domains/e3qidA1

e3qidA1

UID: 000184258

PDB

Range: A:7-384
PDB: 3QID chain A(all domains)
UniProt: Q80J95 (all domains)
Gene: ORF1

Molecule: RNA dependent RNA polymerase

3D Structure

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Related Domains

Browse other domains in RdRP_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRdRP_1(304.48.1.8)

Ligands

in contact, ≤ 4 Å

MANGANESE (III) IONMN3
metal

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ion

Pfam Families

Viral RNA-dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 3QID RCSB PDB: 3QID PDBe: 3QID UniProt: Q80J95

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.