ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hvfA2 - ECOD Domain | ECOD

ECOD/Domains/e5hvfA2

e5hvfA2

UID: 001842997

PDB

Range: A:2-93
PDB: 5HVF chain A(all domains)
UniProt: Q96IY4 (all domains)
Gene: CPB2

Molecule: Carboxypeptidase B2

3D Structure

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Related Domains

Browse other domains in Propep_M14 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupProtease propeptides/inhibitors(304.7)

TT-groupProtease propeptides/inhibitors(304.7.1)

FFamilyPropep_M14(304.7.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Citrate anion)

Citrate anionFLC
within 5 Å only

Shown in the structure viewer.

Pfam Families

PF02244Propep_M14

Carboxypeptidase activation peptide

ClanCL0570PPP-I

External Links

ECOD PDB View: 5HVF RCSB PDB: 5HVF PDBe: 5HVF UniProt: Q96IY4

Downloads

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Drug annotations from DrugDomain.