ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5i4lM51 - ECOD Domain | ECOD

ECOD/Domains/e5i4lM51

e5i4lM51

UID: 001843422

PDB

Range: M5:2-204
PDB: 5I4L chain M5(all domains)
UniProt: P05748 (all domains)
Gene: RPL15A

Molecule: 60S ribosomal protein L15-A

3D Structure

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Related Domains

Browse other domains in Ribosomal_L15e →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRibosomal proteins S24e, L23 and L15e(304.109)

TT-groupRibosomal proteins S24e, L23 and L15e(304.109.1)

FFamilyRibosomal_L15e(304.109.1.3)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
osmium (III) hexammineOHX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00827Ribosomal_L15e

Ribosomal L15

ClanCL0652S24e_L23_L15e

External Links

ECOD PDB View: 5I4L RCSB PDB: 5I4L PDBe: 5I4L UniProt: P05748

Downloads

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