ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ydpB1 - ECOD Domain | ECOD

ECOD/Domains/e4ydpB1

e4ydpB1

UID: 001843735

PDB

Range: B:1-83
PDB: 4YDP chain B(all domains)
UniProt: O75112 (all domains)
Gene: LDB3

Molecule: LIM domain-binding protein 3

3D Structure

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Related Domains

Browse other domains in PDZ →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPDZ domain(7)

HH-groupPDZ domain(7.1)

TT-groupPDZ domain(7.1.1)

FFamilyPDZ(7.1.1.1)

Ligands

in contact, ≤ 4 Å

Glutamic acidGLU
drugDrugBank DB00142
LeucineLEU
drugDrugBank DB00149

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PDZ domain

ClanCL0466PDZ-like

External Links

ECOD PDB View: 4YDP RCSB PDB: 4YDP PDBe: 4YDP UniProt: O75112

Downloads

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