ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4zepB1 - ECOD Domain | ECOD

ECOD/Domains/e4zepB1

e4zepB1

UID: 001843822

PDB

Range: B:5-478
PDB: 4ZEP chain B(all domains)
UniProt: W8QF82 (all domains)
Gene: gan1D

Molecule: Putative 6-phospho-beta-galactobiosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_1(2002.1.1.12)

Ligands

in contact, ≤ 4 Å

beta-D-glucose 6-phosphateBG6
drugDrugBank DB04122

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF00232Glyco_hydro_1

Glycosyl hydrolase family 1

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4ZEP RCSB PDB: 4ZEP PDBe: 4ZEP UniProt: W8QF82

Downloads

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Drug annotations from DrugDomain.