ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4zqgB2 - ECOD Domain | ECOD

ECOD/Domains/e4zqgB2

e4zqgB2

UID: 001843873

PDB

Range: B:5-152,B:278-303
PDB: 4ZQG chain B(all domains)
UniProt: D5VAW2 (all domains)

Molecule: 1-deoxy-D-xylulose 5-phosphate reductoisomerase

3D Structure

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Related Domains

Browse other domains in DXP_reductoisom →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyDXP_reductoisom(2003.1.1.33)

Ligands

in contact, ≤ 4 Å

FosmidomycinFOM
drugDrugBank DB02948
NadideNAD
drugDrugBank DB14128
N-cyclohexyltaurine

Pfam Families

PF02670DXP_reductoisom

1-deoxy-D-xylulose 5-phosphate reductoisomerase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4ZQG RCSB PDB: 4ZQG PDBe: 4ZQG UniProt: D5VAW2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB03309within 5 Å only

Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.