ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5caeA1 - ECOD Domain | ECOD

ECOD/Domains/e5caeA1

e5caeA1

UID: 001844138

PDB

Range: A:131-304
PDB: 5CAE chain A(all domains)
UniProt: O19069 (all domains)
Gene: SUCLG1

Molecule: Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial

3D Structure

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Related Domains

Browse other domains in Ligase_CoA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupSuccinyl-CoA synthetase domains(2007.3)

TT-groupSuccinyl-CoA synthetase domains(2007.3.1)

FFamilyLigase_CoA(2007.3.1.1)

Ligands

in contact, ≤ 4 Å

Coenzyme ACOA
drugDrugBank DB01992
Succinic acidSIN
drugDrugBank DB00139
Chloride ion

Pfam Families

PF00549Ligase_CoA

CoA-ligase

ClanCL0506Succ_CoA_synth

External Links

ECOD PDB View: 5CAE RCSB PDB: 5CAE PDBe: 5CAE UniProt: O19069

Downloads

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Magnesium ionMG

metal

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.