ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5caeB2 - ECOD Domain | ECOD

ECOD/Domains/e5caeB2

e5caeB2

UID: 001844141

PDB

Range: B:1-245
PDB: 5CAE chain B(all domains)
UniProt: P53590 (all domains)
Gene: SUCLG2

Molecule: Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial

3D Structure

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Related Domains

Browse other domains in ATP-grasp_2 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyATP-grasp_2(206.1.3.20)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08442ATP-grasp_2

ATP-grasp domain

ClanCL0179ATP-grasp

External Links

ECOD PDB View: 5CAE RCSB PDB: 5CAE PDBe: 5CAE UniProt: P53590

Downloads

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