ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ii2B1 - ECOD Domain | ECOD

ECOD/Domains/e5ii2B1

e5ii2B1

UID: 001844350

PDB

Range: B:652-764
PDB: 5II2 chain B(all domains)
UniProt: Q86U86 (all domains)
Gene: PBRM1

Molecule: Protein polybromo-1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

LuteolinLU2
drugDrugBank DB15584
Potassium ionK
metal

+ 1 additive (Citric acid)

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 5II2 RCSB PDB: 5II2 PDBe: 5II2 UniProt: Q86U86

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Citric acidCIT

DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.