ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5j1pA1 - ECOD Domain | ECOD

ECOD/Domains/e5j1pA1

e5j1pA1

UID: 001844386

PDB

Range: A:0-170
PDB: 5J1P chain A(all domains)
UniProt: Q6GWS6 (all domains)
Gene: L

Molecule: RNA-directed RNA polymerase L

3D Structure

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Related Domains

Browse other domains in ArenaCapSnatch →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyArenaCapSnatch(2008.1.1.66)

Ligands

in contact, ≤ 4 Å

MANGANESE (III) IONMN3
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17296ArenaCapSnatch

Arenavirus cap snatching domain

ClanCL0236PDDEXK

External Links

ECOD PDB View: 5J1P RCSB PDB: 5J1P PDBe: 5J1P UniProt: Q6GWS6

Downloads

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