ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4a3nA1 - ECOD Domain | ECOD

ECOD/Domains/e4a3nA1

e4a3nA1

UID: 000184444

PDB

Range: A:70-134
PDB: 4A3N chain A(all domains)
UniProt: Q9H6I2 (all domains)
Gene: SOX17

Molecule: TRANSCRIPTION FACTOR SOX-17

3D Structure

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Related Domains

Browse other domains in HMG_box →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHMG-box-like(190)

HH-groupHMG-box(190.1)

TT-groupHMG-box(190.1.1)

FFamilyHMG_box(190.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00505HMG_box

HMG (high mobility group) box

ClanCL0114HMG-box

External Links

ECOD PDB View: 4A3N RCSB PDB: 4A3N PDBe: 4A3N UniProt: Q9H6I2

Downloads

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