ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2riqA2 - ECOD Domain | ECOD

ECOD/Domains/e2riqA2

e2riqA2

UID: 000184915

RepresentativePDB

Range: A:291-331
PDB: 2RIQ chain A(all domains)
UniProt: P09874 (all domains)
Gene: PARP1

Molecule: Poly [ADP-ribose] polymerase 1

3D Structure

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Related Domains

Browse other domains in PADR1_Zn_ribbon →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyPADR1_Zn_ribbon(375.1.1.36)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08063Zn_ribbon_PADR1

PADR1 domain, zinc ribbon fold

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 2RIQ RCSB PDB: 2RIQ PDBe: 2RIQ UniProt: P09874

Downloads

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