ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3cskA1 - ECOD Domain | ECOD

ECOD/Domains/e3cskA1

e3cskA1

UID: 000185139

RepresentativePDB

Range: A:2-711
PDB: 3CSK chain A(all domains)
UniProt: Q08225 (all domains)
Gene: YOL057W

Molecule: Probable dipeptidyl-peptidase 3

3D Structure

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Related Domains

Browse other domains in Peptidase_M49 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M49(2498.1.1.23)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03571Peptidase_M49

Peptidase family M49

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 3CSK RCSB PDB: 3CSK PDBe: 3CSK UniProt: Q08225

Downloads

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