ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2e8yB2 - ECOD Domain | ECOD

ECOD/Domains/e2e8yB2

e2e8yB2

UID: 001851839

PDB

Range: B:198-622
PDB: 2E8Y chain B(all domains)
UniProt: C0SPA0 (all domains)
Gene: amyX

Molecule: AmyX protein

3D Structure

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Related Domains

Browse other domains in Alpha-amylase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha-amylase(2002.1.1.4)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00128Alpha-amylase

Alpha amylase, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 2E8Y RCSB PDB: 2E8Y PDBe: 2E8Y UniProt: C0SPA0

Downloads

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