ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4fj6C2 - ECOD Domain | ECOD

ECOD/Domains/e4fj6C2

e4fj6C2

UID: 001852012

PDB

Range: C:188-539
PDB: 4FJ6 chain C(all domains)
UniProt: A6LG40 (all domains)
Gene: BDI_2946

Molecule: glycoside hydrolase family 33, candidate sialidase

3D Structure

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Related Domains

Browse other domains in BNR, BNR_3 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyBNR, BNR_3(5.1.3.143)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

BNR/Asp-box repeat

ClanCL0186Beta_propeller

BNR repeat-like domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 4FJ6 RCSB PDB: 4FJ6 PDBe: 4FJ6 UniProt: A6LG40

Downloads

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