ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3epzA1 - ECOD Domain | ECOD

ECOD/Domains/e3epzA1

e3epzA1

UID: 000185217

RepresentativePDB

Range: A:350-501
PDB: 3EPZ chain A(all domains)
UniProt: P26358 (all domains)
Gene: DNMT1

Molecule: DNA (cytosine-5)-methyltransferase 1

3D Structure

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Related Domains

Browse other domains in DNMT1-RFD →

Classification

AArchitecturebeta barrels(a.1)

XX-groupReplication foci-targeting sequence N-terminal domain(3497)

HH-groupReplication foci-targeting sequence N-terminal domain(3497.1)

TT-groupReplication foci-targeting sequence N-terminal domain(3497.1.1)

FFamilyDNMT1-RFD(3497.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta-D-GlucoseBGC
drugDrugBank DB02379
Sodium ionNA
metal
Zinc ionZN

Pfam Families

PF12047DNMT1-RFD

Cytosine specific DNA methyltransferase replication foci domain

External Links

ECOD PDB View: 3EPZ RCSB PDB: 3EPZ PDBe: 3EPZ UniProt: P26358

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.