ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3epzA2 - ECOD Domain | ECOD

ECOD/Domains/e3epzA2

e3epzA2

UID: 000185218

RepresentativePDB

Range: A:502-599
PDB: 3EPZ chain A(all domains)
UniProt: P26358 (all domains)
Gene: DNMT1

Molecule: DNA (cytosine-5)-methyltransferase 1

3D Structure

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Related Domains

Browse other domains in DNMT1-RFD →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupReplication foci-targeting sequence C-terminal domain(101.33)

TT-groupReplication foci-targeting sequence C-terminal domain(101.33.1)

FFamilyDNMT1-RFD(101.33.1.1)

Ligands

in contact, ≤ 4 Å

Beta-D-GlucoseBGC
drugDrugBank DB02379
Sodium ionNA
metal

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

PF12047DNMT1-RFD

Cytosine specific DNA methyltransferase replication foci domain

External Links

ECOD PDB View: 3EPZ RCSB PDB: 3EPZ PDBe: 3EPZ UniProt: P26358

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.